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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908643.1_cds_XP_016458804.1_52396
CDS Infomation

[gene=LOC107782431] [db_xref=GeneID:107782431] [protein=CLP protease regulatory subunit CLPX3, mitochondrial-like isoform X2] [protein_id=XP_016458804.1] [location=complement(join(121388..121462,121667..121825,121920..122042,122214..122276,122834..122938,123063..123162,123255..123325,124251..124307,125692..125769,125947..126021,126545..126595,127081..127160,128060..128148,128322..128383,128993..129068,129099..129886))] [gbkey=CDS]
Sequence

ATGTCCGGAATATGGAGATGGAGAAATCTAAGACACTCACCTGTTACGAGGAGGAGGAGA
ACAACAACGACAACGGCGATTACGAGGACAATAACCTCAATTCAACAAGAGGAACAACAA
CAGCAGCATCGAACATACGTGAATTGGCTGCACGTGGGTTCTCACGTGAAGCGGAGAGAG
TCTCTCATCGGGGTACAAGCAAGGTACAAGTGGGACCGGGGCGGTTCCTCCGATGAGTAT
CGCACTTCTCCGAGAAGGATTAGGGCAGAGGCTTATTGCCCTCGTTGCTCTAAACACATG
GATCTTCTATTCAGTAATCGTAATCACCACCTCATCCCTCCTCCTACTAACGACGATGAT
AAAACTAATAATAGCAATGAAAATAGTGCCGCTGCTGCTGCTAGTAATTTAAAAAGTGAA
GCAGGTGCAGGTGGTCCTTACCAGGCAGTGAATCTTTGCCCCAATTGTAAAACGGCTTAC
TACTTCAGGCCCAACAAGATGGCACCACTTCAAGGTAGTTTCTTTGAAATTGGGAGAGTG
AAAGGCAATGGTAATGGTAAAAGAATGAATAATAGTGATGAAGAGAATAAGAGGCTGAGG
CCTTCCTTTTGGGAGTCGTTGAAATCCTACGGTGGTGAGCCACCTGAAAATTGGCCACCA
CCTCCGCCACCGGGTAATGGGCTGGCGGTGCATACACCTCCAGGCCCACCATTTGCACCT
GGACTCAATCTGATACGGGCTGCTGGACCAGAGGGAAAAAATGGCGGCACAGATGAAGGT
AGTGAAGAGAAGAATTTGCCAACGCCAAAGGAGATCTGCAAGGGACTTGATAAATTTGTC
ATAGGTCAAGAGCGTGCAAAAAAGGTGCTTTCAGTGGGTGTTTATAATCACTACAAAAGG
ATTTACCATGCTTCATTGCAGAAAGGGTCTGGAGCAGAATCAGCGAGGGATGATAGTGAA
GAAAATGTGGAACTGGAAAAAAGCAACGTGCTTTTGATGGGGCCTACTGGATCAGGGAAA
ACACTACTTGCGAAAACACTTGCACGCTTTGTGAATGTGCCTTTTGTTATTGCAGATGCA
ACAACCTTAACACAGGCTGGATATGTTGGTGAAGATGTCGAATCCATATTGTACAAGTTA
CTTACGGTTGCTGAATTTAATGTGCAAGCAGCACAACAAGGGATGATCTACATTGATGAA
GTCGATAAGATAACAAAGAAGGCTGAGAGCTTAAATATTAGCAGAGATGTTTCTGGGGAA
GGAGTTCAGCAGGCACTACTGAAAATGCTCGAAGGAACTATTGTGAATGTACCTGAAAAG
GGACAAAGGAAGCATCCTCGTGGTGATCATATTCAGATAGATACAAAAGACATTCTTTTT
ATCTGTGGCGGCGCATTCATTGATTTGGAGAAAACTATTTCAGAGAGACGACAGGATTCT
TCTATTGGTTTTGGAGCTCCAGTTCGCGCCAACATGAGAACTGGTGGAGTAACTAATGCA
ACTGTAACATCATCCTTGCTAGAATCTGTAGAAAGTAGTGATTTTATTTCATACGGCCTC
ATACCAGAGTTTATTGGGCGCTTTCCTATTTTGGTTAGTTTATCTGCACTGACGGAGGAC
CAGCTTGTTCAGGTCCTCACTGAACCCAAAAATGCTCTTTGCAAGCAATATAAAAAGCTA
TTTAGCATGAATAATACTAAACTACATTTTACGGAGGGAGCATTAAGGTTGATTGCCAAG
AAAGCGATGGCTAAAAATACTGGTGCGAGGGGATTGAGAGCCATACTTGAAAGCATCTTA
ACTGATGCTATGTATGAGATTCCTGATGTCAAAGCTGGAGATGATAGAGTAGATGCTATT
GTGGTGGATGAAGAGTCAGTAGGTGCAGTAAATGCACCTGGATGTGGTGGGAAGGTACTT
CGTGGAGATGGTGCTCTGCCACGGTATCTTGCTCAGGCACATTCGGGAGATCAAAGAGAA
AATCATGGGATGGCCGAAACCGAGCTGCAGGAGGGTGAGTCTGAAGTCTCATCTAGAGCA
ATAAGCATGTAA

Peptide Sequence

PEP ID

XP_016458804.1
PEP Infomation

PREDICTED: CLP protease regulatory subunit CLPX3, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MSGIWRWRNLRHSPVTRRRRTTTTTAITRTITSIQQEEQQQQHRTYVNWLHVGSHVKRRE
SLIGVQARYKWDRGGSSDEYRTSPRRIRAEAYCPRCSKHMDLLFSNRNHHLIPPPTNDDD
KTNNSNENSAAAAASNLKSEAGAGGPYQAVNLCPNCKTAYYFRPNKMAPLQGSFFEIGRV
KGNGNGKRMNNSDEENKRLRPSFWESLKSYGGEPPENWPPPPPPGNGLAVHTPPGPPFAP
GLNLIRAAGPEGKNGGTDEGSEEKNLPTPKEICKGLDKFVIGQERAKKVLSVGVYNHYKR
IYHASLQKGSGAESARDDSEENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADA
TTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGE
GVQQALLKMLEGTIVNVPEKGQRKHPRGDHIQIDTKDILFICGGAFIDLEKTISERRQDS
SIGFGAPVRANMRTGGVTNATVTSSLLESVESSDFISYGLIPEFIGRFPILVSLSALTED
QLVQVLTEPKNALCKQYKKLFSMNNTKLHFTEGALRLIAKKAMAKNTGARGLRAILESIL
TDAMYEIPDVKAGDDRVDAIVVDEESVGAVNAPGCGGKVLRGDGALPRYLAQAHSGDQRE
NHGMAETELQEGESEVSSRAISM

Transcript Sequence

Gene sequence data has not been registered.